Have you checked the resistance of the coils incase something has fallen into the magneto while the engine was running and attached itself to a magnet and damaged the coils, or the earth wires. If you look in the heavy maintenance manual it gives you all the resistance values. It would be worth studying the diagrams and values then getting a multimeter and checking them all. I will not accept that both modules have "burnt out" together, they are completely independent.
Cheers Mark